Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 LINC01126-201ENST00000623515 1646 ntBASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV30A0A087WSZ9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 TSPY7P-201ENST00000431358 1114 ntBASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 AC134043.2-201ENST00000624206 2238 ntBASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV30A0A087WSZ9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 TMEM191A-211ENST00000637163 1067 ntBASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 NFIC-211ENST00000641145 8399 ntBASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms