Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV18A0A075B6X5 AC009102.3-201ENST00000623118 1491 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 AL023284.2-201ENST00000405850 579 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 AC239809.2-201ENST00000415381 517 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 AC069152.1-201ENST00000438030 544 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 MCCD1P1-208ENST00000445732 328 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 AC069544.1-201ENST00000609399 999 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 AL121761.2-201ENST00000598007 1648 ntBASIC15.52■□□□□ 0.08
TRAV18A0A075B6X5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV18A0A075B6X5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV18A0A075B6X5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV18A0A075B6X5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV18A0A075B6X5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV18A0A075B6X5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 RPS2P4-201ENST00000476944 856 ntBASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 AP002982.1-201ENST00000492365 877 ntBASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 AL163051.1-201ENST00000569214 1512 ntBASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV18A0A075B6X5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV18A0A075B6X5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms