Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AL023806.1-201ENST00000603994 1649 ntBASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 FAM207BP-201ENST00000447172 505 ntBASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 AC091390.4-202ENST00000476426 537 ntBASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 AP000692.2-201ENST00000608391 879 ntBASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.34■□□□□ 0.37
AP4B1Q9Y6B7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4B1Q9Y6B7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 AC073912.3-201ENST00000624414 853 ntBASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.33■□□□□ 0.36
AP4B1Q9Y6B7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 KRT8P41-201ENST00000533985 1514 ntBASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 TSPY15P-201ENST00000457163 923 ntBASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.32■□□□□ 0.36
AP4B1Q9Y6B7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms