Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHA3Q9Y5H8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 AC133963.1-201ENST00000504166 1679 ntBASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHA3Q9Y5H8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHA3Q9Y5H8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AC099398.1-201ENST00000567919 2776 ntBASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AL157888.1-201ENST00000631930 593 ntBASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 AC012313.1-201ENST00000593393 3059 ntBASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA3Q9Y5H8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHA3Q9Y5H8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms