Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHTOPQ9Y3Y2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CHTOPQ9Y3Y2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 POM121L4P-202ENST00000427789 1891 ntBASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 AC145098.2-201ENST00000623593 3026 ntBASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 AL355472.2-201ENST00000422958 438 ntBASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 AP006587.1-201ENST00000534129 1502 ntBASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CHTOPQ9Y3Y2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHTOPQ9Y3Y2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHTOPQ9Y3Y2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CHTOPQ9Y3Y2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.96□□□□□ -0.34
CHTOPQ9Y3Y2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms