Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 DUTP2-201ENST00000519164 463 ntBASIC21.18■□□□□ 0.98
SMC3Q9UQE7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PP12613-201ENST00000424958 2230 ntBASIC21.18■□□□□ 0.98
SMC3Q9UQE7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 AC132938.6-201ENST00000623828 1655 ntBASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMC3Q9UQE7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 AC009947.2-201ENST00000444014 672 ntBASIC21.17■□□□□ 0.98
SMC3Q9UQE7 AC128688.1-201ENST00000487626 519 ntBASIC21.17■□□□□ 0.98
SMC3Q9UQE7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMC3Q9UQE7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.16■□□□□ 0.98
SMC3Q9UQE7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMC3Q9UQE7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 KRT8P9-201ENST00000558927 1449 ntBASIC21.15■□□□□ 0.98
SMC3Q9UQE7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.15■□□□□ 0.98
SMC3Q9UQE7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms