Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 AC124864.1-201ENST00000623408 392 ntBASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 KRT8P47-201ENST00000604727 1398 ntBASIC20.59■□□□□ 0.89
PCDHA4Q9UN74 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHA4Q9UN74 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHA4Q9UN74 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 AL845331.1-201ENST00000424978 1190 ntBASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 AP002383.4-201ENST00000442518 975 ntBASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 AC069148.1-201ENST00000608741 768 ntBASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 AL353801.3-201ENST00000609898 542 ntBASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 NOC2LP2-201ENST00000407594 1944 ntBASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHA4Q9UN74 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHA4Q9UN74 AC018470.1-201ENST00000624790 3129 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms