Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGC3Q9UN70 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 TSPY22P-201ENST00000427496 604 ntBASIC19■□□□□ 0.63
PCDHGC3Q9UN70 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 MTCL1P1-201ENST00000446207 792 ntBASIC19■□□□□ 0.63
PCDHGC3Q9UN70 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGC3Q9UN70 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 RN7SL606P-201ENST00000472779 293 ntBASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 AC116407.2-201ENST00000613639 860 ntBASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 AC116407.4-201ENST00000623319 1061 ntBASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 AC012317.2-201ENST00000623305 2251 ntBASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGC3Q9UN70 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 KRT8P26-201ENST00000534154 1276 ntBASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGC3Q9UN70 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms