Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 AC104109.2-201ENST00000602919 1418 ntBASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 AC092910.1-201ENST00000482027 1129 ntBASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 HLA-J-201ENST00000462773 1622 ntBASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DNMT3BQ9UBC3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 AL139288.1-201ENST00000623748 933 ntBASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 AP000867.4-201ENST00000641616 219 ntBASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
DNMT3BQ9UBC3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 FAM220CP-201ENST00000395253 831 ntBASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 BX842568.4-201ENST00000421222 227 ntBASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 AC007967.3-201ENST00000434308 558 ntBASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 AC098831.1-202ENST00000438821 336 ntBASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 MTDHP4-201ENST00000600287 670 ntBASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DNMT3BQ9UBC3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms