Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC10Q9NYD6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXC10Q9NYD6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HOXC10Q9NYD6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXC10Q9NYD6 PHGDH-209ENST00000641074 1780 ntBASIC20.57■□□□□ 0.88
HOXC10Q9NYD6 AC093010.1-201ENST00000473625 1624 ntBASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 AC120498.9-201ENST00000339021 3867 ntBASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 AC010460.3-201ENST00000511359 1579 ntBASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 MIR1233-2-201ENST00000408138 82 ntBASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 MIR1233-1-201ENST00000408722 82 ntBASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 LAGE3P1-201ENST00000425356 484 ntBASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC10Q9NYD6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AC140113.2-201ENST00000604370 208 ntBASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AC073592.4-201ENST00000623827 446 ntBASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AC073592.3-201ENST00000625118 1834 ntBASIC20.55■□□□□ 0.88
HOXC10Q9NYD6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 COX5BP2-201ENST00000392354 334 ntBASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 MED15P5-201ENST00000423150 992 ntBASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC10Q9NYD6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 BX005266.1-201ENST00000473402 457 ntBASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 UNC93B6-202ENST00000528242 690 ntBASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 AL356488.2-201ENST00000602755 427 ntBASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC10Q9NYD6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms