Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 FZD10-202ENST00000539839 3282 ntBASIC20.88■□□□□ 0.93
RNF216Q9NWF9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 RN7SKP38-201ENST00000410782 309 ntBASIC20.88■□□□□ 0.93
RNF216Q9NWF9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 UPK3BP1-201ENST00000428678 509 ntBASIC20.88■□□□□ 0.93
RNF216Q9NWF9 MTND2P20-201ENST00000440805 661 ntBASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AP000550.4-202ENST00000639755 178 ntBASIC20.88■□□□□ 0.93
RNF216Q9NWF9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 KRT8P41-201ENST00000533985 1514 ntBASIC20.88■□□□□ 0.93
RNF216Q9NWF9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC018470.1-201ENST00000624790 3129 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AL031133.1-201ENST00000406807 723 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 ATP5C1P1-201ENST00000441945 895 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC105313.1-201ENST00000509121 353 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 MTND1P22-201ENST00000510572 951 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 LYVE1-203ENST00000529598 936 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC009269.2-201ENST00000559892 474 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 CD24P2-201ENST00000565486 219 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC025811.1-201ENST00000604312 472 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC011558.1-201ENST00000623459 338 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AL358472.4-201ENST00000633140 710 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AC106858.1-201ENST00000637497 429 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 NOC2LP1-202ENST00000452600 2235 ntBASIC20.87■□□□□ 0.93
RNF216Q9NWF9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RNF216Q9NWF9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 SSR1P2-201ENST00000415208 787 ntBASIC20.86■□□□□ 0.93
RNF216Q9NWF9 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 DNAJB3-202ENST00000449667 1266 ntBASIC20.86■□□□□ 0.93
RNF216Q9NWF9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 AP003041.3-201ENST00000527151 707 ntBASIC20.86■□□□□ 0.93
RNF216Q9NWF9 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF216Q9NWF9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms