Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 NCF1C-201ENST00000438382 1427 ntBASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 CYMP-203ENST00000474680 1263 ntBASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 SNHG9-202ENST00000564014 471 ntBASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SLC52A1Q9NWF4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC52A1Q9NWF4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 PKD1P6-201ENST00000343738 4769 ntBASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 HTR5BP-201ENST00000430851 1154 ntBASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC52A1Q9NWF4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC25.64■■□□□ 1.69
SLC52A1Q9NWF4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLC52A1Q9NWF4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
SLC52A1Q9NWF4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
SLC52A1Q9NWF4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC25.64■■□□□ 1.69
SLC52A1Q9NWF4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 AC148477.5-201ENST00000625164 1645 ntBASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 RPS15P9-201ENST00000494093 319 ntBASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SLC52A1Q9NWF4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 AL513190.1-201ENST00000621254 727 ntBASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC52A1Q9NWF4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 PON3-203ENST00000427422 894 ntTSL 3 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 MIR4751-201ENST00000578027 74 ntBASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC52A1Q9NWF4 ELL2P1-201ENST00000413990 1906 ntBASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms