Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 PCDHA1-201ENST00000378133 2726 ntBASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 AC011506.1-201ENST00000474329 610 ntBASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 AC006058.3-201ENST00000606217 1069 ntBASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 AC008622.2-201ENST00000617006 1229 ntBASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPTLC3Q9NUV7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 AC133963.1-201ENST00000504166 1679 ntBASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.86■□□□□ 0.77
SPTLC3Q9NUV7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 AL109659.2-201ENST00000606809 1674 ntBASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 FAM207BP-201ENST00000447172 505 ntBASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 AC130371.2-201ENST00000619443 611 ntBASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 AL031985.4-201ENST00000642138 673 ntBASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
SPTLC3Q9NUV7 AL356309.3-201ENST00000624132 1934 ntBASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTLC3Q9NUV7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms