Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 ECEL1P2-202ENST00000465689 757 ntBASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 AC092865.7-201ENST00000641832 219 ntBASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 NEK4P2-201ENST00000580004 1012 ntBASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRTM1Q9HBL6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 MIR3917-201ENST00000580971 93 ntBASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 AC008687.5-201ENST00000593746 558 ntBASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRTM1Q9HBL6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LRTM1Q9HBL6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms