Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 FAM220CP-201ENST00000395253 831 ntBASIC18.57■□□□□ 0.56
BRD9Q9H8M2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 AL031598.1-201ENST00000561511 1773 ntBASIC18.57■□□□□ 0.56
BRD9Q9H8M2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 AL356309.3-201ENST00000624132 1934 ntBASIC18.57■□□□□ 0.56
BRD9Q9H8M2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRD9Q9H8M2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 AC092183.1-201ENST00000469884 875 ntBASIC18.56■□□□□ 0.56
BRD9Q9H8M2 OR7E14P-202ENST00000530490 1290 ntBASIC18.56■□□□□ 0.56
BRD9Q9H8M2 AC145285.3-201ENST00000564603 959 ntBASIC18.56■□□□□ 0.56
BRD9Q9H8M2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 AC027601.4-201ENST00000611259 610 ntBASIC18.56■□□□□ 0.56
BRD9Q9H8M2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.56■□□□□ 0.56
BRD9Q9H8M2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 KRT18P65-201ENST00000439811 1286 ntBASIC18.55■□□□□ 0.56
BRD9Q9H8M2 AC092910.1-201ENST00000482027 1129 ntBASIC18.55■□□□□ 0.56
BRD9Q9H8M2 IGHV3-22-201ENST00000520721 359 ntBASIC18.55■□□□□ 0.56
BRD9Q9H8M2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRD9Q9H8M2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 MED15P5-201ENST00000423150 992 ntBASIC18.54■□□□□ 0.56
BRD9Q9H8M2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BRD9Q9H8M2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms