Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 LINC00602-201ENST00000629776 2065 ntBASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.9■□□□□ 0.3
AMBRA1Q9C0C7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
AMBRA1Q9C0C7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.89■□□□□ 0.3
AMBRA1Q9C0C7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
AMBRA1Q9C0C7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.89■□□□□ 0.3
AMBRA1Q9C0C7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
AMBRA1Q9C0C7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 HCG11-201ENST00000411553 5696 ntBASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 MIR149-201ENST00000384879 89 ntBASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 CA15P1-201ENST00000481698 905 ntBASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 AC097488.1-201ENST00000507834 756 ntBASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 FITM1-202ENST00000559294 800 ntBASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 AP005242.2-201ENST00000580065 1175 ntBASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AMBRA1Q9C0C7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
AMBRA1Q9C0C7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 AP000525.1-201ENST00000608286 694 ntBASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 AC093010.1-201ENST00000473625 1624 ntBASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AMBRA1Q9C0C7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms