Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 AL671883.3-201ENST00000603274 991 ntBASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 AL121912.1-201ENST00000603683 238 ntBASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 REXO1L9P-201ENST00000604264 2108 ntBASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 AL591684.3-201ENST00000605187 298 ntBASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 REXO1L6P-202ENST00000619970 1078 ntBASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 NME4-212ENST00000621774 904 ntTSL 3 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
KRTAP4-3Q9BYR4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 AL096828.2-201ENST00000567259 1965 ntBASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 AC106820.2-201ENST00000563775 3264 ntBASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 GMCL1P1-201ENST00000463439 1581 ntBASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 AC243591.1-201ENST00000452967 1364 ntBASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 KRT8P47-201ENST00000604727 1398 ntBASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 FAM197Y8-203ENST00000450145 560 ntBASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 AC120114.3-201ENST00000611923 658 ntBASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC6.11□□□□□ -1.43
KRTAP4-3Q9BYR4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms