Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 RARRES2P10-201ENST00000564312 460 ntBASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 AL162741.1-201ENST00000565563 1558 ntBASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 AP006587.1-201ENST00000534129 1502 ntBASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 ZNF815P-204ENST00000434898 1737 ntBASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 AC004264.1-201ENST00000608354 794 ntBASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 LINC02228-204ENST00000642115 2962 ntBASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFAF3Q9BU61 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NDUFAF3Q9BU61 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NDUFAF3Q9BU61 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms