Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 AC012618.2-201ENST00000428058 849 ntBASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 AP005242.2-201ENST00000580065 1175 ntBASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.24■□□□□ 0.03
HDHD3Q9BSH5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HDHD3Q9BSH5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 GCSHP5-201ENST00000443090 522 ntBASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 UBE2SP1-201ENST00000450587 669 ntBASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 AP003071.4-201ENST00000562276 1284 ntBASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 AL353719.1-201ENST00000566847 864 ntBASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 KRT8P7-201ENST00000533003 1432 ntBASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HDHD3Q9BSH5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HDHD3Q9BSH5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDHD3Q9BSH5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.21■□□□□ 0.03
HDHD3Q9BSH5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDHD3Q9BSH5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms