Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PTPN18Q99952 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN18Q99952 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.56■□□□□ 0.88
PTPN18Q99952 AC239800.4-201ENST00000603712 296 ntBASIC20.56■□□□□ 0.88
PTPN18Q99952 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN18Q99952 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN18Q99952 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN18Q99952 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN18Q99952 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN18Q99952 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTPN18Q99952 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTPN18Q99952 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN18Q99952 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTPN18Q99952 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.55■□□□□ 0.88
PTPN18Q99952 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN18Q99952 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.55■□□□□ 0.88
PTPN18Q99952 RPS15P9-201ENST00000494093 319 ntBASIC20.55■□□□□ 0.88
PTPN18Q99952 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN18Q99952 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN18Q99952 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN18Q99952 PKD1P6-201ENST00000343738 4769 ntBASIC20.55■□□□□ 0.88
PTPN18Q99952 AC148477.5-201ENST00000625164 1645 ntBASIC20.55■□□□□ 0.88
PTPN18Q99952 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN18Q99952 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPN18Q99952 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN18Q99952 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN18Q99952 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN18Q99952 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN18Q99952 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN18Q99952 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN18Q99952 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN18Q99952 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PTPN18Q99952 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN18Q99952 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN18Q99952 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.54■□□□□ 0.88
PTPN18Q99952 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
PTPN18Q99952 AL020989.1-201ENST00000422979 469 ntBASIC20.54■□□□□ 0.88
PTPN18Q99952 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN18Q99952 AL096865.1-201ENST00000606796 927 ntBASIC20.54■□□□□ 0.88
PTPN18Q99952 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN18Q99952 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PTPN18Q99952 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PTPN18Q99952 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PTPN18Q99952 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
PTPN18Q99952 TSEN15P1-201ENST00000423257 515 ntBASIC20.53■□□□□ 0.88
PTPN18Q99952 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.53■□□□□ 0.88
PTPN18Q99952 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.53■□□□□ 0.88
PTPN18Q99952 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.53■□□□□ 0.88
PTPN18Q99952 PDPK2P-202ENST00000562415 1191 ntBASIC20.53■□□□□ 0.88
PTPN18Q99952 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN18Q99952 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.53■□□□□ 0.88
PTPN18Q99952 AC004877.2-201ENST00000623941 599 ntBASIC20.53■□□□□ 0.88
PTPN18Q99952 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTPN18Q99952 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PTPN18Q99952 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTPN18Q99952 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTPN18Q99952 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPN18Q99952 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTPN18Q99952 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN18Q99952 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPN18Q99952 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN18Q99952 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN18Q99952 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN18Q99952 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPN18Q99952 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.52■□□□□ 0.88
PTPN18Q99952 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN18Q99952 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPN18Q99952 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPN18Q99952 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PTPN18Q99952 AC132938.5-201ENST00000624980 1813 ntBASIC20.52■□□□□ 0.88
PTPN18Q99952 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PTPN18Q99952 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPN18Q99952 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms