Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 MIR1224-201ENST00000408193 85 ntBASIC17.56■□□□□ 0.4
PKP4Q99569 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.56■□□□□ 0.4
PKP4Q99569 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.56■□□□□ 0.4
PKP4Q99569 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.56■□□□□ 0.4
PKP4Q99569 AL390719.2-201ENST00000606993 987 ntBASIC17.56■□□□□ 0.4
PKP4Q99569 AC010331.1-201ENST00000611423 582 ntBASIC17.56■□□□□ 0.4
PKP4Q99569 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.56■□□□□ 0.4
PKP4Q99569 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.56■□□□□ 0.4
PKP4Q99569 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.56■□□□□ 0.4
PKP4Q99569 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 AC005332.8-201ENST00000622750 2735 ntBASIC17.56■□□□□ 0.4
PKP4Q99569 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PKP4Q99569 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PKP4Q99569 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 AL353692.3-201ENST00000407031 1396 ntBASIC17.55■□□□□ 0.4
PKP4Q99569 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.55■□□□□ 0.4
PKP4Q99569 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 Z83836.1-201ENST00000624605 1642 ntBASIC17.55■□□□□ 0.4
PKP4Q99569 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PKP4Q99569 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 KRT18P35-201ENST00000510488 1269 ntBASIC17.55■□□□□ 0.4
PKP4Q99569 FAM86EP-206ENST00000510506 987 ntBASIC17.55■□□□□ 0.4
PKP4Q99569 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.55■□□□□ 0.4
PKP4Q99569 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.55■□□□□ 0.4
PKP4Q99569 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PKP4Q99569 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.55■□□□□ 0.4
PKP4Q99569 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.55■□□□□ 0.4
PKP4Q99569 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.55■□□□□ 0.4
PKP4Q99569 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.55■□□□□ 0.4
PKP4Q99569 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP4Q99569 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PKP4Q99569 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.54■□□□□ 0.4
PKP4Q99569 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PKP4Q99569 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PKP4Q99569 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP4Q99569 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.54■□□□□ 0.4
PKP4Q99569 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PKP4Q99569 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PKP4Q99569 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.54■□□□□ 0.4
PKP4Q99569 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP4Q99569 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PKP4Q99569 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.54■□□□□ 0.4
PKP4Q99569 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.54■□□□□ 0.4
PKP4Q99569 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.54■□□□□ 0.4
PKP4Q99569 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP4Q99569 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP4Q99569 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PKP4Q99569 BCL2-203ENST00000589955 5011 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms