Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AP000692.2-201ENST00000608391 879 ntBASIC14.4□□□□□ -0.1
RNF2Q99496 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RNF2Q99496 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF2Q99496 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RNF2Q99496 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF2Q99496 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF2Q99496 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RNF2Q99496 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RNF2Q99496 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF2Q99496 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 AC008894.3-201ENST00000624324 3103 ntBASIC14.39□□□□□ -0.11
RNF2Q99496 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF2Q99496 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RNF2Q99496 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RNF2Q99496 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RNF2Q99496 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RNF2Q99496 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
RNF2Q99496 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RNF2Q99496 AC093827.2-201ENST00000512654 315 ntBASIC14.39□□□□□ -0.11
RNF2Q99496 CKBP1-201ENST00000565489 1086 ntBASIC14.39□□□□□ -0.11
RNF2Q99496 SLC25A1P4-201ENST00000567977 778 ntBASIC14.39□□□□□ -0.11
RNF2Q99496 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF2Q99496 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF2Q99496 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 DGCR10-201ENST00000609839 495 ntBASIC14.39□□□□□ -0.11
RNF2Q99496 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RNF2Q99496 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF2Q99496 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF2Q99496 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 AC012317.2-201ENST00000623305 2251 ntBASIC14.38□□□□□ -0.11
RNF2Q99496 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 AC097488.1-201ENST00000507834 756 ntBASIC14.38□□□□□ -0.11
RNF2Q99496 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 MIR4497-201ENST00000583208 89 ntBASIC14.38□□□□□ -0.11
RNF2Q99496 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RNF2Q99496 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF2Q99496 AC066615.1-201ENST00000640911 628 ntBASIC14.38□□□□□ -0.11
RNF2Q99496 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RNF2Q99496 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RNF2Q99496 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF2Q99496 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF2Q99496 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF2Q99496 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms