Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 AC005521.1-201ENST00000393351 872 ntBASIC17.12■□□□□ 0.33
BBS4Q96RK4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 LINC01023-201ENST00000606054 436 ntBASIC17.12■□□□□ 0.33
BBS4Q96RK4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 AC026471.1-201ENST00000564629 3026 ntBASIC17.12■□□□□ 0.33
BBS4Q96RK4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 AC008764.6-201ENST00000595909 2069 ntBASIC17.11■□□□□ 0.33
BBS4Q96RK4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 AC068880.1-201ENST00000507289 2297 ntBASIC17.11■□□□□ 0.33
BBS4Q96RK4 AP000997.3-201ENST00000623333 2250 ntBASIC17.11■□□□□ 0.33
BBS4Q96RK4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 AL441883.1-201ENST00000566170 1045 ntBASIC17.11■□□□□ 0.33
BBS4Q96RK4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 AC139887.4-201ENST00000607877 719 ntBASIC17.11■□□□□ 0.33
BBS4Q96RK4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.11■□□□□ 0.33
BBS4Q96RK4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BBS4Q96RK4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.11■□□□□ 0.33
BBS4Q96RK4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 RASA4DP-201ENST00000460726 1199 ntBASIC17.1■□□□□ 0.33
BBS4Q96RK4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 AC011558.1-201ENST00000623459 338 ntBASIC17.1■□□□□ 0.33
BBS4Q96RK4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BBS4Q96RK4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
BBS4Q96RK4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms