Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 CR392000.1-201ENST00000624770 1228 ntBASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 AL138688.1-201ENST00000624851 1594 ntBASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.05■□□□□ 0.32
NSMCE2Q96MF7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NSMCE2Q96MF7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 AL353807.1-201ENST00000427475 662 ntBASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 AC011506.1-201ENST00000474329 610 ntBASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NSMCE2Q96MF7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NSMCE2Q96MF7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms