Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNX27Q96L92 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX27Q96L92 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX27Q96L92 AKR1C7P-201ENST00000305623 895 ntBASIC19.4■□□□□ 0.7
SNX27Q96L92 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX27Q96L92 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX27Q96L92 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.4■□□□□ 0.7
SNX27Q96L92 AC009533.2-201ENST00000543664 586 ntBASIC19.4■□□□□ 0.7
SNX27Q96L92 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.4■□□□□ 0.7
SNX27Q96L92 LINC01711-201ENST00000598340 967 ntBASIC19.4■□□□□ 0.7
SNX27Q96L92 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX27Q96L92 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SNX27Q96L92 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 KRT8P47-201ENST00000604727 1398 ntBASIC19.4■□□□□ 0.7
SNX27Q96L92 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX27Q96L92 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 AC009113.1-201ENST00000570267 2443 ntBASIC19.4■□□□□ 0.7
SNX27Q96L92 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX27Q96L92 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX27Q96L92 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.39■□□□□ 0.7
SNX27Q96L92 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.39■□□□□ 0.7
SNX27Q96L92 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
SNX27Q96L92 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.39■□□□□ 0.7
SNX27Q96L92 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.39■□□□□ 0.7
SNX27Q96L92 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.39■□□□□ 0.7
SNX27Q96L92 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.39■□□□□ 0.69
SNX27Q96L92 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 RCN1P2-201ENST00000398357 915 ntBASIC19.39■□□□□ 0.69
SNX27Q96L92 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.39■□□□□ 0.69
SNX27Q96L92 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SNX27Q96L92 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.39■□□□□ 0.69
SNX27Q96L92 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.39■□□□□ 0.69
SNX27Q96L92 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 MIR5100-201ENST00000579544 119 ntBASIC19.39■□□□□ 0.69
SNX27Q96L92 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.39■□□□□ 0.69
SNX27Q96L92 AC104692.2-201ENST00000603054 253 ntBASIC19.39■□□□□ 0.69
SNX27Q96L92 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SNX27Q96L92 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.39■□□□□ 0.69
SNX27Q96L92 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNX27Q96L92 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNX27Q96L92 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX27Q96L92 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX27Q96L92 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
SNX27Q96L92 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX27Q96L92 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.38■□□□□ 0.69
SNX27Q96L92 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.38■□□□□ 0.69
SNX27Q96L92 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX27Q96L92 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SNX27Q96L92 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.38■□□□□ 0.69
SNX27Q96L92 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX27Q96L92 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX27Q96L92 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SNX27Q96L92 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.38■□□□□ 0.69
SNX27Q96L92 AC011467.2-201ENST00000598425 242 ntBASIC19.38■□□□□ 0.69
SNX27Q96L92 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX27Q96L92 AC104581.1-202ENST00000635932 2618 ntBASIC19.38■□□□□ 0.69
SNX27Q96L92 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.38■□□□□ 0.69
SNX27Q96L92 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX27Q96L92 AC026471.1-201ENST00000564629 3026 ntBASIC19.38■□□□□ 0.69
SNX27Q96L92 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX27Q96L92 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms