Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.45■□□□□ 0.7
LRCH3Q96II8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
LRCH3Q96II8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 AL020996.1-203ENST00000536896 2307 ntBASIC19.45■□□□□ 0.7
LRCH3Q96II8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 AC006557.2-201ENST00000592985 1240 ntBASIC19.44■□□□□ 0.7
LRCH3Q96II8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH3Q96II8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LRCH3Q96II8 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.44■□□□□ 0.7
LRCH3Q96II8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.43■□□□□ 0.7
LRCH3Q96II8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 DUX4L27-201ENST00000554796 1261 ntBASIC19.43■□□□□ 0.7
LRCH3Q96II8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.43■□□□□ 0.7
LRCH3Q96II8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.43■□□□□ 0.7
LRCH3Q96II8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH3Q96II8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH3Q96II8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH3Q96II8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH3Q96II8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH3Q96II8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 HCG4B-203ENST00000450128 991 ntBASIC19.42■□□□□ 0.7
LRCH3Q96II8 AP005018.1-201ENST00000525475 301 ntBASIC19.42■□□□□ 0.7
LRCH3Q96II8 MIR4751-201ENST00000578027 74 ntBASIC19.42■□□□□ 0.7
LRCH3Q96II8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH3Q96II8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH3Q96II8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH3Q96II8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
LRCH3Q96II8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.41■□□□□ 0.7
LRCH3Q96II8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH3Q96II8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms