Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 AL121761.2-201ENST00000598007 1648 ntBASIC17.17■□□□□ 0.34
LRRC58Q96CX6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 AC100803.2-201ENST00000562459 1963 ntBASIC17.17■□□□□ 0.34
LRRC58Q96CX6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.16■□□□□ 0.34
LRRC58Q96CX6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.16■□□□□ 0.34
LRRC58Q96CX6 AC128676.1-201ENST00000454392 318 ntBASIC17.16■□□□□ 0.34
LRRC58Q96CX6 RPPH1-201ENST00000516869 333 ntBASIC17.16■□□□□ 0.34
LRRC58Q96CX6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC58Q96CX6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 AC116562.2-201ENST00000507042 360 ntBASIC17.15■□□□□ 0.34
LRRC58Q96CX6 AC097488.1-201ENST00000507834 756 ntBASIC17.15■□□□□ 0.34
LRRC58Q96CX6 AC009065.1-201ENST00000564055 1225 ntBASIC17.15■□□□□ 0.34
LRRC58Q96CX6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC58Q96CX6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
LRRC58Q96CX6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.14■□□□□ 0.34
LRRC58Q96CX6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 CD177P1-201ENST00000606252 935 ntBASIC17.14■□□□□ 0.33
LRRC58Q96CX6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms