Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 DGCR10-201ENST00000609839 495 ntBASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
FOXRED1Q96CU9 AC036111.1-201ENST00000533973 1582 ntBASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 AL596275.1-201ENST00000423464 877 ntBASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TSPY7P-201ENST00000431358 1114 ntBASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 NUDT16P1-203ENST00000513809 620 ntBASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXRED1Q96CU9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 AL023806.1-201ENST00000603994 1649 ntBASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXRED1Q96CU9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms