Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 AC007967.3-201ENST00000434308 558 ntBASIC17.94■□□□□ 0.46
ARRDC3Q96B67 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 AC008608.2-201ENST00000606089 416 ntBASIC17.94■□□□□ 0.46
ARRDC3Q96B67 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.94■□□□□ 0.46
ARRDC3Q96B67 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 AC090164.3-201ENST00000610780 2143 ntBASIC17.93■□□□□ 0.46
ARRDC3Q96B67 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.93■□□□□ 0.46
ARRDC3Q96B67 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 AC022898.2-201ENST00000616822 1312 ntBASIC17.93■□□□□ 0.46
ARRDC3Q96B67 AC097374.2-201ENST00000618617 1306 ntBASIC17.93■□□□□ 0.46
ARRDC3Q96B67 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.93■□□□□ 0.46
ARRDC3Q96B67 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 AC106795.1-205ENST00000512851 1056 ntBASIC17.92■□□□□ 0.46
ARRDC3Q96B67 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 AL355877.3-201ENST00000622820 899 ntBASIC17.92■□□□□ 0.46
ARRDC3Q96B67 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.92■□□□□ 0.46
ARRDC3Q96B67 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.92■□□□□ 0.46
ARRDC3Q96B67 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 AC010460.3-201ENST00000511359 1579 ntBASIC17.91■□□□□ 0.46
ARRDC3Q96B67 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARRDC3Q96B67 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms