Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.25□□□□□ -0.13
NPIPB3Q92617 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 GCSHP5-201ENST00000443090 522 ntBASIC14.25□□□□□ -0.13
NPIPB3Q92617 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 AP003071.4-201ENST00000562276 1284 ntBASIC14.25□□□□□ -0.13
NPIPB3Q92617 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 AC139713.2-201ENST00000641328 2723 ntBASIC14.25□□□□□ -0.13
NPIPB3Q92617 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPB3Q92617 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPB3Q92617 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 UNC93B2-201ENST00000285383 730 ntBASIC14.24□□□□□ -0.13
NPIPB3Q92617 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 WWOX-216ENST00000569818 525 ntBASIC14.24□□□□□ -0.13
NPIPB3Q92617 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 AC112497.1-201ENST00000624824 639 ntBASIC14.24□□□□□ -0.13
NPIPB3Q92617 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPB3Q92617 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPB3Q92617 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.23□□□□□ -0.13
NPIPB3Q92617 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 CCR12P-201ENST00000446203 998 ntBASIC14.23□□□□□ -0.13
NPIPB3Q92617 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NPIPB3Q92617 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NPIPB3Q92617 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPB3Q92617 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB3Q92617 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms