Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 AC004832.2-201ENST00000426397 482 ntBASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 AC012640.2-201ENST00000561606 901 ntBASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.58■□□□□ 0.89
U2AF1L4Q8WU68 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
U2AF1L4Q8WU68 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 SART3-203ENST00000546611 1184 ntBASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
U2AF1L4Q8WU68 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 KRT18P28-201ENST00000453838 1332 ntBASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 RNA5SP416-201ENST00000516838 111 ntBASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 AC005336.2-201ENST00000593183 939 ntBASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
U2AF1L4Q8WU68 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 OR7E14P-202ENST00000530490 1290 ntBASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.55■□□□□ 0.88
U2AF1L4Q8WU68 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms