Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.38■■□□□ 1.17
SH3TC1Q8TE82 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SH3TC1Q8TE82 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.38■■□□□ 1.17
SH3TC1Q8TE82 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SH3TC1Q8TE82 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SH3TC1Q8TE82 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.38■■□□□ 1.17
SH3TC1Q8TE82 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 IGHV3-22-201ENST00000520721 359 ntBASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 OR7E14P-202ENST00000530490 1290 ntBASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 NKAPP1-205ENST00000585790 367 ntBASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 AC093010.1-201ENST00000473625 1624 ntBASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 ZNF259P1-201ENST00000407656 1365 ntBASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SH3TC1Q8TE82 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 AC096633.1-201ENST00000422446 749 ntBASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 PHGDH-209ENST00000641074 1780 ntBASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 HLA-J-201ENST00000462773 1622 ntBASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SH3TC1Q8TE82 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 AC012640.2-201ENST00000561606 901 ntBASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 AC145285.3-201ENST00000564603 959 ntBASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 WIZP1-201ENST00000531444 2299 ntBASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
SH3TC1Q8TE82 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 KRT18P13-201ENST00000400056 1290 ntBASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 AC010460.3-201ENST00000511359 1579 ntBASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 AC073592.3-201ENST00000625118 1834 ntBASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SH3TC1Q8TE82 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.33■■□□□ 1.17
SH3TC1Q8TE82 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms