Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 AL592071.1-201ENST00000611956 408 ntBASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 RN7SL606P-201ENST00000472779 293 ntBASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 TPSP2-201ENST00000561760 610 ntBASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH20Q8N6Y1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH20Q8N6Y1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH20Q8N6Y1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PCDH20Q8N6Y1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PCDH20Q8N6Y1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PCDH20Q8N6Y1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH20Q8N6Y1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH20Q8N6Y1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ESPNP-201ENST00000270691 2015 ntBASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 TSPY12P-201ENST00000421279 868 ntBASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 AC124864.1-201ENST00000623408 392 ntBASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH20Q8N6Y1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms