Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AC004817.3-201ENST00000602957 2129 ntBASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC44A3Q8N4M1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC44A3Q8N4M1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.39■□□□□ 0.54
SLC44A3Q8N4M1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC44A3Q8N4M1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC44A3Q8N4M1 AL049812.1-201ENST00000432563 2267 ntBASIC18.39■□□□□ 0.54
SLC44A3Q8N4M1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.39■□□□□ 0.54
SLC44A3Q8N4M1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 METTL21AP1-201ENST00000438852 635 ntBASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 AC073592.4-201ENST00000623827 446 ntBASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SLC44A3Q8N4M1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 YBX1P5-201ENST00000509441 847 ntBASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 SNHG9-202ENST00000564014 471 ntBASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 AL499627.1-201ENST00000569373 2188 ntBASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC44A3Q8N4M1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SLC44A3Q8N4M1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC44A3Q8N4M1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC44A3Q8N4M1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC44A3Q8N4M1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SLC44A3Q8N4M1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms