Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.05■□□□□ 0.32
CARFQ8N187 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CARFQ8N187 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CARFQ8N187 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CARFQ8N187 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CARFQ8N187 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.04■□□□□ 0.32
CARFQ8N187 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CARFQ8N187 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.04■□□□□ 0.32
CARFQ8N187 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.04■□□□□ 0.32
CARFQ8N187 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 DDX43P3-201ENST00000441064 443 ntBASIC17.04■□□□□ 0.32
CARFQ8N187 AC009078.2-202ENST00000463353 338 ntBASIC17.04■□□□□ 0.32
CARFQ8N187 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.04■□□□□ 0.32
CARFQ8N187 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.04■□□□□ 0.32
CARFQ8N187 AL773604.1-201ENST00000617417 272 ntBASIC17.04■□□□□ 0.32
CARFQ8N187 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.04■□□□□ 0.32
CARFQ8N187 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.04■□□□□ 0.32
CARFQ8N187 AP000867.4-201ENST00000641616 219 ntBASIC17.04■□□□□ 0.32
CARFQ8N187 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CARFQ8N187 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.04■□□□□ 0.32
CARFQ8N187 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.04■□□□□ 0.32
CARFQ8N187 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.04■□□□□ 0.32
CARFQ8N187 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CARFQ8N187 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CARFQ8N187 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.03■□□□□ 0.32
CARFQ8N187 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CARFQ8N187 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 AC090164.3-201ENST00000610780 2143 ntBASIC17.03■□□□□ 0.32
CARFQ8N187 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.03■□□□□ 0.32
CARFQ8N187 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.03■□□□□ 0.32
CARFQ8N187 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CARFQ8N187 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.03■□□□□ 0.32
CARFQ8N187 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.03■□□□□ 0.32
CARFQ8N187 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.03■□□□□ 0.32
CARFQ8N187 AC073648.2-201ENST00000510116 352 ntBASIC17.03■□□□□ 0.32
CARFQ8N187 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CARFQ8N187 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 MTDHP3-201ENST00000594186 672 ntBASIC17.03■□□□□ 0.32
CARFQ8N187 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.03■□□□□ 0.32
CARFQ8N187 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CARFQ8N187 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.03■□□□□ 0.32
CARFQ8N187 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CARFQ8N187 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.02■□□□□ 0.32
CARFQ8N187 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.02■□□□□ 0.32
CARFQ8N187 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.02■□□□□ 0.32
CARFQ8N187 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.02■□□□□ 0.32
CARFQ8N187 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 RPS2P28-201ENST00000314255 741 ntBASIC17.02■□□□□ 0.32
CARFQ8N187 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.02■□□□□ 0.32
CARFQ8N187 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CARFQ8N187 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.02■□□□□ 0.32
CARFQ8N187 FAM197Y8-203ENST00000450145 560 ntBASIC17.02■□□□□ 0.32
CARFQ8N187 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.02■□□□□ 0.32
CARFQ8N187 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.02■□□□□ 0.32
CARFQ8N187 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.02■□□□□ 0.32
CARFQ8N187 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
CARFQ8N187 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CARFQ8N187 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.02■□□□□ 0.31
CARFQ8N187 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CARFQ8N187 AC010460.3-201ENST00000511359 1579 ntBASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms