Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AC103564.2-201ENST00000432853 1299 ntBASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 ADH5P3-201ENST00000433842 1137 ntBASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AC010507.1-201ENST00000633895 436 ntBASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 CROCCP3-202ENST00000420820 1947 ntBASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AL589182.2-201ENST00000619332 1049 ntBASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 AL805961.1-202ENST00000641562 540 ntBASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL27A1Q8IZC6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL27A1Q8IZC6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 RFPL4AP1-201ENST00000530883 850 ntBASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 AL078644.1-201ENST00000609881 752 ntBASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL27A1Q8IZC6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.83■□□□□ 0.29
COL27A1Q8IZC6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL27A1Q8IZC6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
COL27A1Q8IZC6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 MKNK2P1-201ENST00000437526 628 ntBASIC16.83■□□□□ 0.28
COL27A1Q8IZC6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms