Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 AP000593.1-201ENST00000393668 712 ntBASIC17.23■□□□□ 0.35
RAB43Q86YS6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 TOB2P1-201ENST00000469761 992 ntBASIC17.23■□□□□ 0.35
RAB43Q86YS6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 AC012615.1-201ENST00000565797 1299 ntBASIC17.23■□□□□ 0.35
RAB43Q86YS6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 LINC01711-201ENST00000598340 967 ntBASIC17.23■□□□□ 0.35
RAB43Q86YS6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 AC068880.1-201ENST00000507289 2297 ntBASIC17.23■□□□□ 0.35
RAB43Q86YS6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 FAAHP1-202ENST00000446499 1238 ntBASIC17.22■□□□□ 0.35
RAB43Q86YS6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 RN7SL510P-201ENST00000581311 263 ntBASIC17.22■□□□□ 0.35
RAB43Q86YS6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 AL121772.3-201ENST00000610840 674 ntBASIC17.22■□□□□ 0.35
RAB43Q86YS6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 HEIH-201ENST00000623091 1652 ntBASIC17.22■□□□□ 0.35
RAB43Q86YS6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RAB43Q86YS6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB43Q86YS6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 VENTXP7-201ENST00000475503 772 ntBASIC17.21■□□□□ 0.35
RAB43Q86YS6 AC104819.1-201ENST00000504587 486 ntBASIC17.21■□□□□ 0.35
RAB43Q86YS6 GUSBP12-201ENST00000513727 720 ntBASIC17.21■□□□□ 0.35
RAB43Q86YS6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB43Q86YS6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB43Q86YS6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAB43Q86YS6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms