Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 NUS1P1-201ENST00000446295 882 ntBASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 AP005901.3-202ENST00000581653 237 ntBASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 IGHV3-47-201ENST00000425060 335 ntBASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 MINOS1P3-201ENST00000457048 203 ntBASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 AC012313.10-201ENST00000623509 926 ntBASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
LRRTM4Q86VH4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 DUSP5P1-201ENST00000441325 1139 ntBASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 AC099336.1-202ENST00000602961 463 ntBASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms