Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
USP45Q70EL2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.06■□□□□ 0.48
USP45Q70EL2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.06■□□□□ 0.48
USP45Q70EL2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
USP45Q70EL2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
USP45Q70EL2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP45Q70EL2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
USP45Q70EL2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.05■□□□□ 0.48
USP45Q70EL2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.05■□□□□ 0.48
USP45Q70EL2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
USP45Q70EL2 AC246785.2-201ENST00000432512 513 ntBASIC18.05■□□□□ 0.48
USP45Q70EL2 MTCL1P1-201ENST00000446207 792 ntBASIC18.05■□□□□ 0.48
USP45Q70EL2 LINC00265-3P-201ENST00000447588 903 ntBASIC18.05■□□□□ 0.48
USP45Q70EL2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 MIR3180-1-201ENST00000580374 94 ntBASIC18.05■□□□□ 0.48
USP45Q70EL2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 MIR3180-3-201ENST00000584616 94 ntBASIC18.05■□□□□ 0.48
USP45Q70EL2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.05■□□□□ 0.48
USP45Q70EL2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.05■□□□□ 0.48
USP45Q70EL2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.05■□□□□ 0.48
USP45Q70EL2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP45Q70EL2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP45Q70EL2 AC135050.7-201ENST00000624508 2218 ntBASIC18.04■□□□□ 0.48
USP45Q70EL2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP45Q70EL2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.04■□□□□ 0.48
USP45Q70EL2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.04■□□□□ 0.48
USP45Q70EL2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP45Q70EL2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
USP45Q70EL2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.04■□□□□ 0.48
USP45Q70EL2 TOB2P1-201ENST00000469761 992 ntBASIC18.04■□□□□ 0.48
USP45Q70EL2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
USP45Q70EL2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.04■□□□□ 0.48
USP45Q70EL2 Z69720.1-201ENST00000601483 472 ntBASIC18.04■□□□□ 0.48
USP45Q70EL2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
USP45Q70EL2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP45Q70EL2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP45Q70EL2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.04■□□□□ 0.48
USP45Q70EL2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.04■□□□□ 0.48
USP45Q70EL2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.04■□□□□ 0.48
USP45Q70EL2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
USP45Q70EL2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.04■□□□□ 0.48
USP45Q70EL2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
USP45Q70EL2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP45Q70EL2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
USP45Q70EL2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.03■□□□□ 0.48
USP45Q70EL2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.03■□□□□ 0.48
USP45Q70EL2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
USP45Q70EL2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP45Q70EL2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms