Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.44■□□□□ 0.22
NIPAL3Q6P499 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 AC139713.2-201ENST00000641328 2723 ntBASIC16.44■□□□□ 0.22
NIPAL3Q6P499 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 AC012317.2-201ENST00000623305 2251 ntBASIC16.43■□□□□ 0.22
NIPAL3Q6P499 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 AL023973.1-201ENST00000624619 620 ntBASIC16.43■□□□□ 0.22
NIPAL3Q6P499 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 SIRPAP1-201ENST00000448467 1770 ntBASIC16.43■□□□□ 0.22
NIPAL3Q6P499 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NIPAL3Q6P499 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.42■□□□□ 0.22
NIPAL3Q6P499 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 COX11P1-201ENST00000489116 835 ntBASIC16.42■□□□□ 0.22
NIPAL3Q6P499 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms