Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ESPNP-201ENST00000270691 2015 ntBASIC18.91■□□□□ 0.62
RNF43Q68DV7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF43Q68DV7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF43Q68DV7 KRT89P-201ENST00000620027 1478 ntBASIC18.9■□□□□ 0.62
RNF43Q68DV7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 RNF126P1-202ENST00000569893 925 ntBASIC18.9■□□□□ 0.62
RNF43Q68DV7 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF43Q68DV7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF43Q68DV7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.89■□□□□ 0.62
RNF43Q68DV7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 AC016734.2-201ENST00000624325 1377 ntBASIC18.89■□□□□ 0.61
RNF43Q68DV7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF43Q68DV7 AC112777.1-201ENST00000540175 1423 ntBASIC18.89■□□□□ 0.61
RNF43Q68DV7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF43Q68DV7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF43Q68DV7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
RNF43Q68DV7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms