Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 AC079328.2-201ENST00000561241 3354 ntBASIC17.01■□□□□ 0.31
LPCAT4Q643R3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.01■□□□□ 0.31
LPCAT4Q643R3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 AC132872.4-202ENST00000622924 2756 ntBASIC17■□□□□ 0.31
LPCAT4Q643R3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LPCAT4Q643R3 AC093010.1-201ENST00000473625 1624 ntBASIC17■□□□□ 0.31
LPCAT4Q643R3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 PCDHB17P-201ENST00000539533 2393 ntBASIC17■□□□□ 0.31
LPCAT4Q643R3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17■□□□□ 0.31
LPCAT4Q643R3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17■□□□□ 0.31
LPCAT4Q643R3 MIR6821-201ENST00000617625 74 ntBASIC17■□□□□ 0.31
LPCAT4Q643R3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LPCAT4Q643R3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LPCAT4Q643R3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.99■□□□□ 0.31
LPCAT4Q643R3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 AC006015.1-201ENST00000429970 570 ntBASIC16.99■□□□□ 0.31
LPCAT4Q643R3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.99■□□□□ 0.31
LPCAT4Q643R3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 AL603756.1-201ENST00000606511 2163 ntBASIC16.99■□□□□ 0.31
LPCAT4Q643R3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LPCAT4Q643R3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LPCAT4Q643R3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LPCAT4Q643R3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LPCAT4Q643R3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.98■□□□□ 0.31
LPCAT4Q643R3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms