Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 KRT18P32-201ENST00000424695 1287 ntBASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PRPF38BQ5VTL8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 SPDYE21P-201ENST00000413323 827 ntBASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 AC003101.2-201ENST00000612557 442 ntBASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 AL357033.4-201ENST00000617703 1807 ntBASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.41■□□□□ 0.7
PRPF38BQ5VTL8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 MIR6787-201ENST00000616675 61 ntBASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 AC068587.9-201ENST00000641814 219 ntBASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPF38BQ5VTL8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRPF38BQ5VTL8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.39■□□□□ 0.7
PRPF38BQ5VTL8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 AC138969.3-201ENST00000546612 1459 ntBASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 AC138932.2-201ENST00000548268 1459 ntBASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 AC126755.4-201ENST00000549796 1459 ntBASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms