Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LGSNQ5TDP6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 MIR3180-4-201ENST00000582223 153 ntBASIC18.19■□□□□ 0.5
LGSNQ5TDP6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 AC141586.5-201ENST00000624546 2050 ntBASIC18.19■□□□□ 0.5
LGSNQ5TDP6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LGSNQ5TDP6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 NUDT16P1-203ENST00000513809 620 ntBASIC18.18■□□□□ 0.5
LGSNQ5TDP6 DUTP2-201ENST00000519164 463 ntBASIC18.18■□□□□ 0.5
LGSNQ5TDP6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 LINC01126-201ENST00000623515 1646 ntBASIC18.18■□□□□ 0.5
LGSNQ5TDP6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.18■□□□□ 0.5
LGSNQ5TDP6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 CRYGFP-201ENST00000418459 633 ntBASIC18.17■□□□□ 0.5
LGSNQ5TDP6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 MIR4651-201ENST00000582622 73 ntBASIC18.17■□□□□ 0.5
LGSNQ5TDP6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms