Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 AC007967.3-201ENST00000434308 558 ntBASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 BNIP3P42-201ENST00000454982 569 ntBASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 BNIP3P29-201ENST00000598302 571 ntBASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 AC011447.5-201ENST00000616168 564 ntBASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 KRT8P50-201ENST00000562022 1438 ntBASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 AC100757.3-201ENST00000622361 1406 ntBASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.09■□□□□ 0.81
COL13A1Q5TAT6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 MIR6775-201ENST00000617557 69 ntBASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.08■□□□□ 0.81
COL13A1Q5TAT6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL13A1Q5TAT6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL13A1Q5TAT6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL13A1Q5TAT6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 AL353779.1-201ENST00000434793 351 ntBASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL13A1Q5TAT6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 MYCLP1-201ENST00000372451 1075 ntBASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 AC099548.2-209ENST00000480264 625 ntBASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL13A1Q5TAT6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 PTCHD3P3-201ENST00000403073 906 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms