Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDZK1Q5T2W1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDZK1Q5T2W1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.92■□□□□ 0.3
PDZK1Q5T2W1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDZK1Q5T2W1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 SLC25A3P1-201ENST00000443844 931 ntBASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 SEC1P-202ENST00000473944 940 ntBASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 AC010240.3-201ENST00000607688 395 ntBASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 OR6D1P-203ENST00000641209 4860 ntBASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDZK1Q5T2W1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 AC009065.1-201ENST00000564055 1225 ntBASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 NEK4P2-201ENST00000580004 1012 ntBASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDZK1Q5T2W1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDZK1Q5T2W1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDZK1Q5T2W1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDZK1Q5T2W1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms