Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP6AP1LQ52LC2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 SIRPAP1-201ENST00000448467 1770 ntBASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 AC010240.3-201ENST00000607688 395 ntBASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP6AP1LQ52LC2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 AL390955.1-201ENST00000428694 934 ntBASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 AC010653.2-201ENST00000623505 997 ntBASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP6AP1LQ52LC2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6AP1LQ52LC2 AC139713.2-201ENST00000641328 2723 ntBASIC17.42■□□□□ 0.38
ATP6AP1LQ52LC2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP6AP1LQ52LC2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP6AP1LQ52LC2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms