Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH17Q12864 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 LINC00602-201ENST00000629776 2065 ntBASIC18.24■□□□□ 0.51
CDH17Q12864 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH17Q12864 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CDH17Q12864 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDH17Q12864 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH17Q12864 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH17Q12864 YBX1P2-201ENST00000489612 999 ntBASIC18.23■□□□□ 0.51
CDH17Q12864 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH17Q12864 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CDH17Q12864 AC079602.3-201ENST00000623931 403 ntBASIC18.23■□□□□ 0.51
CDH17Q12864 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CDH17Q12864 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 LINC00896-202ENST00000609602 2128 ntBASIC18.23■□□□□ 0.51
CDH17Q12864 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH17Q12864 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH17Q12864 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CDH17Q12864 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH17Q12864 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 AC005521.1-201ENST00000393351 872 ntBASIC18.22■□□□□ 0.51
CDH17Q12864 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDH17Q12864 SPDYE15P-201ENST00000424157 909 ntBASIC18.22■□□□□ 0.51
CDH17Q12864 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH17Q12864 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH17Q12864 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH17Q12864 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CDH17Q12864 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH17Q12864 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDH17Q12864 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH17Q12864 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH17Q12864 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDH17Q12864 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDH17Q12864 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDH17Q12864 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH17Q12864 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH17Q12864 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
CDH17Q12864 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH17Q12864 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms