Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CL1P78423 AL157888.1-201ENST00000631930 593 ntBASIC14.55□□□□□ -0.08
CX3CL1P78423 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
CX3CL1P78423 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 AL162741.1-201ENST00000565563 1558 ntBASIC14.55□□□□□ -0.08
CX3CL1P78423 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
CX3CL1P78423 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CX3CL1P78423 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.54□□□□□ -0.08
CX3CL1P78423 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CX3CL1P78423 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CX3CL1P78423 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CX3CL1P78423 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CX3CL1P78423 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.54□□□□□ -0.08
CX3CL1P78423 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CX3CL1P78423 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.54□□□□□ -0.08
CX3CL1P78423 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.54□□□□□ -0.08
CX3CL1P78423 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.54□□□□□ -0.08
CX3CL1P78423 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.54□□□□□ -0.08
CX3CL1P78423 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CX3CL1P78423 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CX3CL1P78423 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CX3CL1P78423 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CL1P78423 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CX3CL1P78423 ESPNP-201ENST00000270691 2015 ntBASIC14.54□□□□□ -0.08
CX3CL1P78423 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CX3CL1P78423 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.54□□□□□ -0.08
CX3CL1P78423 AC135776.1-201ENST00000319817 2481 ntBASIC14.54□□□□□ -0.08
CX3CL1P78423 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CX3CL1P78423 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CX3CL1P78423 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.53□□□□□ -0.08
CX3CL1P78423 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CX3CL1P78423 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CX3CL1P78423 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 RNF152P1-201ENST00000397754 604 ntBASIC14.53□□□□□ -0.08
CX3CL1P78423 RCN1P1-201ENST00000400413 996 ntBASIC14.53□□□□□ -0.08
CX3CL1P78423 AK4P3-201ENST00000418260 669 ntBASIC14.53□□□□□ -0.08
CX3CL1P78423 TSPY5P-201ENST00000426936 936 ntBASIC14.53□□□□□ -0.08
CX3CL1P78423 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.53□□□□□ -0.08
CX3CL1P78423 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.53□□□□□ -0.08
CX3CL1P78423 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.53□□□□□ -0.08
CX3CL1P78423 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.53□□□□□ -0.08
CX3CL1P78423 AC006011.2-201ENST00000621313 1158 ntBASIC14.53□□□□□ -0.08
CX3CL1P78423 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms