Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 KRT18P65-201ENST00000439811 1286 ntBASIC18.93■□□□□ 0.62
USP46P62068 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.93■□□□□ 0.62
USP46P62068 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.93■□□□□ 0.62
USP46P62068 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.92■□□□□ 0.62
USP46P62068 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
USP46P62068 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.92■□□□□ 0.62
USP46P62068 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.92■□□□□ 0.62
USP46P62068 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
USP46P62068 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
USP46P62068 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.92■□□□□ 0.62
USP46P62068 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP46P62068 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
USP46P62068 AC138932.1-201ENST00000534164 6830 ntBASIC18.91■□□□□ 0.62
USP46P62068 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.91■□□□□ 0.62
USP46P62068 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
USP46P62068 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
USP46P62068 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.91■□□□□ 0.62
USP46P62068 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.91■□□□□ 0.62
USP46P62068 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.91■□□□□ 0.62
USP46P62068 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.91■□□□□ 0.62
USP46P62068 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
USP46P62068 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.91■□□□□ 0.62
USP46P62068 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.91■□□□□ 0.62
USP46P62068 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
USP46P62068 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
USP46P62068 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP46P62068 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 AC004870.1-201ENST00000315132 882 ntBASIC18.9■□□□□ 0.62
USP46P62068 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.9■□□□□ 0.62
USP46P62068 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.9■□□□□ 0.62
USP46P62068 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.9■□□□□ 0.62
USP46P62068 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.9■□□□□ 0.62
USP46P62068 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.9■□□□□ 0.62
USP46P62068 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP46P62068 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.9■□□□□ 0.62
USP46P62068 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP46P62068 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP46P62068 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.9■□□□□ 0.62
USP46P62068 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms